BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012F12LP1|AL426405
(848 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1573 1646 0.0
>3x_Contig1573
Length = 10819
Score = 1646 bits (826), Expect = 0.0
Identities = 839/848 (98%)
Strand = Plus / Plus
Query: 1 atcctgtgcttcaacctgtacttgtwtatctctttccactttcgagtgcycgakaagtga 60
||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||
Sbjct: 9566 atcctgtgcttcaacctgtacttgtaaatctctttccactttcgagtgcccgagaagtga 9625
Query: 61 atcgcttatcgaagctgcgaatgtcggcaggctaggcatggcaaggggtacgccgtatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9626 atcgcttatcgaagctgcgaatgtcggcaggctaggcatggcaaggggtacgccgtatga 9685
Query: 121 tgtggtttggttttgatgttcttgttagtagcttgttaaatacgcgtttgttaaaacgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9686 tgtggtttggttttgatgttcttgttagtagcttgttaaatacgcgtttgttaaaacgtc 9745
Query: 181 ttgttttgaataagacgcgtcataagaaggagagaacagaaacgaaacacaagcgaaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9746 ttgttttgaataagacgcgtcataagaaggagagaacagaaacgaaacacaagcgaaact 9805
Query: 241 acagctacagctacagctacagctacagcagctgtaattgatgatgagagcctatatcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9806 acagctacagctacagctacagctacagcagctgtaattgatgatgagagcctatatcaa 9865
Query: 301 tacattctccttgggtgacctaaccgaccgacccttgcaaatacgacgccatcacgtgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9866 tacattctccttgggtgacctaaccgaccgacccttgcaaatacgacgccatcacgtgac 9925
Query: 361 caaattcattaccctccctcgccgtacggagagacacgtgttaaccacatgtttatcacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9926 caaattcattaccctccctcgccgtacggagagacacgtgttaaccacatgtttatcacg 9985
Query: 421 ttgtttccaattgataagtaacaaacacgacttacagttgtttacttcacaagaacaaca 480
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9986 ttgtttccaattgctaagtaacaaacacgacttacagttgtttacttcacaagaacaaca 10045
Query: 481 cgataaacagacacgagcwagactgtatcggctgttggattacgagaatacacacctcac 540
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 10046 cgataaacagacacgagcaagactgtatcggctgttggattacgagaatacacacctcac 10105
Query: 541 gagtatttaawaccaaccacgcgctttttacccttttaawagctaaawacacaacaaaac 600
|||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 10106 gagtatttaaaaccaaccacgcgctttttacccttttaaaagctaaaaacacaacaaaac 10165
Query: 601 aacaacaaatcaacaccagtgttgaagtgataaaagcatgtcaggcaagagaagttatca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10166 aacaacaaatcaacaccagtgttgaagtgataaaagcatgtcaggcaagagaagttatca 10225
Query: 661 ggacgaccaattggacgtcgaagaagctaacaagagacaccaaatggtggacacattgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10226 ggacgaccaattggacgtcgaagaagctaacaagagacaccaaatggtggacacattgtt 10285
Query: 721 gcgtggatccgaggataaggacggtgacaacgacaattcggtgtatgatgatttgttaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10286 gcgtggatccgaggataaggacggtgacaacgacaattcggtgtatgatgatttgttaca 10345
Query: 781 agatccagaggaagtagagaaggaaaacaaagaaaacagagacggtgacaaggtcggtga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10346 agatccagaggaagtagagaaggaaaacaaagaaaacagagacggtgacaaggtcggtga 10405
Query: 841 tgacgagc 848
||||||||
Sbjct: 10406 tgacgagc 10413
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5678
Number of Sequences: 1807
Number of extensions: 5678
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 848
length of database: 10,358,551
effective HSP length: 16
effective length of query: 832
effective length of database: 10,329,639
effective search space: 8594259648
effective search space used: 8594259648
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)